PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC021466.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 490aa    MW: 53558.8 Da    PI: 5.7263
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC021466.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.91.3e-11322364754
                   HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
           HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                   e+Er+RR+++N++f  Lr ++P+       K++K++ L  Av YI++L
  EcC021466.10 322 EAERQRREKLNHRFYALRAVVPNV-----SKMDKSSLLSDAVSYINEL 364
                   79*********************6.....5***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142153.7E-4933207IPR025610Transcription factor MYC/MYB N-terminal
PROSITE profilePS5088816.24315364IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.47E-13318369No hitNo description
SuperFamilySSF474596.94E-16319378IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.9E-15321370IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.0E-9322364IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-15322380IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009825Biological Processmultidimensional cell growth
GO:0010235Biological Processguard mother cell cytokinesis
GO:0015743Biological Processmalate transport
GO:0045824Biological Processnegative regulation of innate immune response
GO:0055114Biological Processoxidation-reduction process
GO:0005886Cellular Componentplasma membrane
GO:0030136Cellular Componentclathrin-coated vesicle
GO:0005506Molecular Functioniron ion binding
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037Molecular Functionheme binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 490 aa     Download sequence    Send to blast
MGELIIYPSS SSSLVFKPMS PTATPPPSLG LTLQQRLQLV VQSQPQWWAY AIFWQLLNHD  60
DGRLLLAWGD GHFQGSTKLT PASRSDCGKL FQALPHDPSN SCPDAAAYVP APTGDITDAE  120
WFYVMSLTRS FSAGDGIPGK ALSTGSLVWL TGARELESYE CDRTKEAELH GIRTLVCIPT  180
GHGVLELGSC DVIPENWGLV QRAKSLFGSD LLLPKHPSPP FQLHQDHCDI SFADIGIIAG  240
LQESDFASHD DYEKKVKKKE PLVEGAGGKP EAPFGSCSYL VESEHSDSGS PFMAVVMTEK  300
GTPKKRGRKP GLGLDPPLNQ VEAERQRREK LNHRFYALRA VVPNVSKMDK SSLLSDAVSY  360
INELKSKISD LESQMQRESK KFKQEVIDAT DNLSTTSSVD HSSPSGCGGS LLEVEVKIVG  420
CDAMIRVQSQ NTNYMSARLM AAMRDLELHI HHASLSAVND LLLQDVVVRV PEGLEGEADL  480
RAALLRALEQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4rqw_A2e-32322078192Transcription factor MYC3
4rqw_B2e-32322078192Transcription factor MYC3
4rs9_A2e-32322078192Transcription factor MYC3
4yz6_A2e-32322078192Transcription factor MYC3
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010031905.10.0PREDICTED: transcription factor MYC2-like
TrEMBLA0A059D0V60.0A0A059D0V6_EUCGR; Uncharacterized protein
STRINGVIT_15s0048g02820.t010.0(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46830.12e-63NACL-inducible gene 1